- PhD -

Manager R&D in bioinformatics


Journal articles


Horvatić A, Guillemin N, Kaab H, McKeegan D, O’Reilly E, Bain M, et al. Integrated dataset on acute phase protein response in chicken challenged with Escherichia coli lipopolysaccharide endotoxin. Data in Brief. 2018 Dec 1;21:684–99.


Franco-Martínez L, Tvarijonaviciute A, Horvatić A, Guillemin N, Cerón JJ, Escribano D, et al. Changes in salivary analytes in canine parvovirus: a high-resolution quantitative proteomic study. Comparative Immunology, Microbiology and Infectious Diseases. 2018 Sep 24


Horvatić A, Guillemin N, Kaab H, McKeegan D, O’Reilly E, Bain M, et al. Quantitative proteomics using tandem mass tags in relation to the acute phase protein response in chicken challenged with Escherichia coli lipopolysaccharide endotoxin. Journal of Proteomics. 2018 Aug 13


Bilić P, Kuleš J, Galan A, Pontes LG de, Guillemin N, Horvatić A, et al. Proteomics in Veterinary Medicine and Animal Science: Neglected Scientific Opportunities with Immediate Impact. PROTEOMICS. 0(0):1800047.


Bilić P, Guillemin N, Kovačević A, Beer Ljubić B, Jović I, Galan A, et al. Serum proteome profiling in canine idiopathic dilated cardiomyopathy using TMT-based quantitative proteomics approach. Journal of Proteomics. 2018 179:110–21.


Kules J, Potocnakova L, Bhide K, Tomassone L, Fuehrer H-P, Horvatic A, Guillemin N, et al. The challenges and advances in diagnosis of vector-borne diseases: where do we stand ? Vector-borne and zoonotic diseases. 2017;


Kules J, Horvatic A, Guillemin N, Galan A, Mrljak V, Bhide M. New approaches and omics tools for mining of vaccine candidates against vector-borne diseases. Mol Biosyst. 2016;12(9):2680–94.


Horvatic A, Kules J, Guillemin N, Galan A, Mrljak V, Bhide M. High-throughput proteomics and the fight against pathogens. Mol Biosyst. 2016;12(8):2373–84.


Guillemin N, Horvatic A, Kules J, Galan A, Mrljak V, Bhide M. Omics approaches to probe markers of disease resistance in animal sciences. Mol Biosyst. 2016;12(7):2036–46.


Galan A, Comor L, Horvatic A, Kules J, Guillemin N, Mrljak V, et al. Library-based display technologies: where do we stand? Mol Biosyst. 2016;12(8):2342–58.


Guillemin N, Dufort I, Sirard M-A. A Genetical Genomics Methodology to Identify Genetic Markers of a Bovine Fertility Phenotype Based on CYP19A1 Gene Expression. Gene Expression to Genetical Genomics 2015 8:9–18. 


Guillemin N, Jurie C, Renand G, Hocquette JF, Micol D, Lepetit J, et al. Different phenotypic and proteomic markers explain variability of beef tenderness across muscles. International Journal of Biology 2012;4(2):26–38. 


Guillemin N, Bonnet M, Jurie C, Picard B. Functional analysis of beef tenderness. J Proteomics. 2011 Dec 21;75(2):352–65.


Guillemin N, Jurie C, Cassar-Malek I, Hocquette J-F, Renand G, Picard B. Variations in the abundance of 24 protein biomarkers of beef tenderness according to muscle and animal type. Animal. 2011 5(6):885–94.


Cassar-Malek I, Guillemin N, Hocquette J-F, Micol D, Bauchart D, Picard B, et al. Expression of DNAJA1 in bovine muscles according to developmental age and management factors. Animal. 2011 5(6):867–74.


Guillemin N, Meunier B, Jurie C, Cassar-Malek I, Hocquette J-F, Leveziel H, et al. Validation of a Dot-Blot Quantitative Technique for Large Scale Analysis. J Physiol Pharmacol. 2009 60:91–7.


Guillemin N, Cassar-Malek I, Hocquette J-F, Jurie C, Micol D, Listrat A, et al. Control of beef tenderness : identification of biological markers. Prod Anim. 2009;22(4):331–44.

All my publications (articles, review, book chapter, presentations, posters, etc...) are freely accessible on ResearchGate, LinkedIn or on request.



HRT4. The guide through EU funds - “Vodič kroz fondove EU” [Internet]. Zagreb, CROATIA: HRT4; 2018. Available from: https://drive.google.com/open?id=1EyAIiBRZCaDTQtIHYxTaM32PuMvqFeXr


HRT1. ERA Chair team of Zagreb [Internet]. Prometheus - “Prometej.” Zagreb, CROATIA: HRT1; 2018. Available from: https://drive.google.com/open?id=1RXngHjDp5DPDfLNj4Tqy9FJ58__XPvkM

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Guillemin, Nicolas. On the utilization of biomarkers in personalized and predictive medicine: perspectives. Presentation on the Biomarkers in Veterinary Medicine conference, 13th September 2008, Zagreb, CROATIA.


Gomes de Pontes Leticia, Festa Sabes Amanda, Guillemin Nicolas. Biomarkers in exosomes in cattle diseases [Internet]. Poster presented at: Fifth Dairycare Conference; 2018 Mar 19; Thessaloniki, GREECE.


Guillemin, Nicolas. Establishment of a DNA-based test for quick diagnostics of canine babesiosis. Poster presented at: The 7th International Congress Veterinary Science and Profession; 2017 May 10; Zagreb, CROATIA.


Guillemin, Nicolas. Bioinformatic investigation of dog babesiosis from host differentially expressed proteins identified by proteomics. Presentation presented at: 11th Central and Eastern uropean Proteomic Conference; 2017 Sep 29; Košice, SLOVAKIA.


Guillemin, Nicolas. Application of genomics and bioinformatics to animal disease researches. Presentation presented at: Molecular biology: Proteomics Era II; 2017 Nov 14; Zagreb, CROATIA.


Guillemin N. Bioinformatic approach for identification of miRNA potential markers of canine babesiosis from proteomics data [Internet]. Poster presented at: 10th Central and Eastern European Proteomic Conference; 2016 Nov 10; Budapest, Hungary. 


Guillemin, Nicolas. 3 in 1 (DNA, RNA, proteins) extraction. Presentation presented at: Post-genomic era of molecular biology: Proteomics era I; 2015 Oct 12; Zagreb, CROATIA.


Guillemin N. Cow fertility markers identified by genetical genomics [Internet]. Poster presented at: 4th Mammalian Embryo Genomics meeting; 2013 Sep 10; Quebec - CANADA. 


Guillemin N. Genetical genomics: a new methodology for fertility using EmbryoGENE tools. Poster presented at: Symposium on Functional Genomics of Early Livestock Development; 2012 Jul 24; Banff - CANADA.


Guillemin N, Hocquette J-F (presenter). Prediction equations of beef tenderness: implication of oxidative stress and apoptosis [Internet]. Presentation presented at: 57. International Congress of Meat Science and Technology (57th ICoMST); 2011 Aug 7; Ghent, BELGIUM. 


Hocquette JF, Chriki S, Cassar-Malek I, Guillemin N, Micol D, Capel C, et al. Prédiction de la tendreté de la viande bovine à partir des caractéristiques biochimiques du muscle et à l’aide d’outils de modélisation. Presentation presented at: Sommet de l’élevage; 2011; Paris, FRANCE.


Guillemin N. Physiological-phenotype approach to find markers - - The new strategy of genetical genomics -. Presentation presented at: The use of genomic-genetic tools to improve dairy cow reproduction; 2011 Nov 24; Quebec, CANADA.


Guillemin N. Stratégie de phénotypage haut débit de la tendreté de la viande bovine. Presentation presented at: 3èmes Journées d’Animation Scientifique du Département de Physiologie Animale et Système d’Élevage; 2009 Jul 10.


Guillemin N. Effect of muscle and animal types on the expression of HSP in cattle muscle. Poster presented at: 11. International Symposium on Ruminant Physiology; 2009 Jun 9; Clermont-Ferrand, FRANCE.


Guillemin N. Validation of potential beef tenderness markers and interpretation of their biological functions. Presentation presented at: International Symposium for Young Scientists; 2008 Sep 9; Lublin, POLAND.


Guillemin N. Validation d’un marqueur potentiel de la tendreté de la viande bovine. Poster presented at: 15. Rencontres autour des Recherches sur les Ruminants; 2008; Paris, France.







Guillemin N. Marqueurs protéiques de la tendreté de la viande bovine : étude prédictive et fonctionnelle [Internet]. Université Blaise Pascal - Clermont-Ferrand II; 2010. Available from: https://tel.archives-ouvertes.fr/tel-00646978


Book sections


Horvatić A, Kuleš J, Guillemin N, Martinković F, Štimac I, Mrljak V, et al. Surface Proteome Biotinylation Combined with Bioinformatic Tools as a Strategy for Predicting Pathogen Interacting Proteins. In: Host-Pathogen Interactions : Methods and Protocols. 2018. p. 83–96. (Methods in Molecular Biology; vol. 1734).


Picard B, Cassar-Malek I, Kaspric N, Guillemin N, Bonnet M. Quest for Novel Muscle Pathway Biomarkers Using Proteomics in Beef Production. In: Reference Module in Life Sciences. Elsevier; 2017. 


Picard B, Meunier B, Barboiron C, Dunoyer N, Guillemin N, Micol D. From protein markers to phenotyping tools for evaluation of beef tenderness. In: Rodrigues P, Eckersall D, de Almeida A, editors. Farm animal proteomics. Wageningen Academic Publishers; 2012. p. 165–8. 


Picard B, Cassar-Malek I, Guillemin N, Bonnet M. Quest for Novel Muscle Pathway Biomarkers by Proteomics in Beef Production. In: Moo-Young M, editor. Comprehensive Biotechnology (Second Edition). Burlington: Academic Press; 2011. p. 395–405.